PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID FANhyb_icon00016064_a.1.g00001.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
Family AP2
Protein Properties Length: 91aa    MW: 10258.4 Da    PI: 12.0183
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
FANhyb_icon00016064_a.1.g00001.1genomekazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP222.82.4e-075686129
                               AP2  1 sgykGVrwdkkrgrWvAeIrd.pseng.krk 29
                                      s y+GV++++++gr++A+++d  ++n  ++k
  FANhyb_icon00016064_a.1.g00001.1 56 SIYRGVTRHRWTGRYEAHLWDkNCWNEsQNK 86
                                      57*******************9888766553 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008471.6E-45688IPR001471AP2/ERF domain
PROSITE profilePS510328.7555791IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 91 aa     Download sequence    Send to blast
MAKLSHQNQK ANGNNNATTT AAAAVNNANA VNKTAVTKVK RTRRSVPRDS PPQRSSIYRG  60
VTRHRWTGRY EAHLWDKNCW NESQNKKGRQ G
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007226618.11e-40hypothetical protein PRUPE_ppa023152mg
SwissprotQ94AN44e-28AP2L1_ARATH; AP2-like ethylene-responsive transcription factor At1g16060
TrEMBLM5XNZ81e-40M5XNZ8_PRUPE; Uncharacterized protein
STRINGVIT_11s0037g00870.t011e-38(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF130034101
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G16060.19e-26ARIA-interacting double AP2 domain protein